{
  "id": "esmfold2-ubiquitin-with-msa",
  "title": "ESMFold2 Ubiquitin MSA Demo",
  "description": "A precomputed ubiquitin structure fixture extracted from the executed Biohub ESMFold2 tutorial notebook output for browser viewer validation.",
  "model": "ESMFold2",
  "mode": "MSA-guided folding",
  "input": {
    "type": "single protein",
    "name": "ubiquitin",
    "chainId": "A",
    "sequenceLength": 76,
    "msaDepth": 1000
  },
  "metrics": {
    "ptm": 0.814,
    "averagePlddtRaw": 0.9
  },
  "files": {
    "mmcif": "/demo/esmfold2-ubiquitin-with-msa.cif"
  },
  "source": {
    "repository": "https://github.com/Biohub/esm",
    "notebook": "https://github.com/Biohub/esm/blob/main/cookbook/tutorials/esmfold2.ipynb",
    "notebookCommit": "f652b471d29da828b31e9b7a9cf7d0a7803240f5",
    "notebookSection": "Example 3: MSA-Guided Folding of Ubiquitin",
    "extraction": "mmCIF text embedded in the executed py3Dmol output"
  },
  "boundary": {
    "livePrediction": false,
    "clinicalUse": false,
    "privateSequenceUpload": false
  }
}